Publications
Journal Articles
McGreig, Jake E., Uri, Hannah, Antczak, Magdalena, Sternberg, Michael J. E., Michaelis, Martin and Wass, Mark N. (2022). 3DLigandSite: structure-based prediction of protein–ligand binding sites. Nucleic Acids Research, 50 (W1), W13-W20. doi: 10.1093/nar/gkac250
Antczak, Magdalena, Cañete, Pablo F., Chen, Zhian, Belle, Clémence and Yu, Di (2022). Evolution of γ chain cytokines: mechanisms, methods and applications. Computational and Structural Biotechnology Journal, 20, 4746-4755. doi: 10.1016/j.csbj.2022.08.050
Bojkova, Denisa, McGreig, Jake E., Mclaughlin, Katie-May, Masterson, Stuart G., Antczak, Magdalena, Widera, Marek, Kraehling, Verena, Ciesek, Sandra, Wass, Mark N., Michaelis, Martin and Cinatl, Jindrich (2021). Differentially conserved amino acid positions may reflect differences in SARS-CoV-2 and SARS-CoV behaviour. Bioinformatics, 37 (16), 2282-2288. doi: 10.1093/bioinformatics/btab094
Zhou, Naihui, Jiang, Yuxiang, Bergquist, Timothy R., Lee, Alexandra J., Kacsoh, Balint Z., Crocker, Alex W., Lewis, Kimberley A., Georghiou, George, Nguyen, Huy N., Hamid, Md Nafiz, Davis, Larry, Dogan, Tunca, Atalay, Volkan, Rifaioglu, Ahmet S., Dalkiran, Alperen, Atalay, Rengul Cetin, Zhang, Chengxin, Hurto, Rebecca L., Freddolino, Peter L., Zhang, Yang, Bhat, Prajwal, Supek, Fran, Fernandez, Jose M., Gemovic, Branislava, Perovic, Vladimir R., Davidovic, Radoslav S., Sumonja, Neven, Veljkovic, Nevena, Asgari, Ehsaneddin ... Friedberg, Iddo (2019). The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens. Genome Biology, 20 (1) 244. doi: 10.1186/s13059-019-1835-8
Antczak, Magdalena, Michaelis, Martin and Wass, Mark N. (2019). Environmental conditions shape the nature of a minimal bacterial genome. Nature Communications, 10 (1) 3100, 3100. doi: 10.1038/s41467-019-10837-2